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hg19 refseq gene models  (Santa Cruz Biotechnology)


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    Santa Cruz Biotechnology hg19 refseq gene models
    Relationship of immunity-related GTPase family M (IRGM) single nucleotide polymorphism to IRGM expression in human terminal ileum and whole blood. RNA-Seq data in the Genotype-Tissue Expression Project portal (https://gtexportal.org/home/) was analyzed to define the relationship of genotypes at rs13361189 (A), rs10065172 (B), and rs9637876 (C) to IRGM mRNA levels in human terminal ileum and whole blood. Box plots depict median and interquartile ranges of transcripts per million (TPM) for mRNA expression of IRGM defined by <t>RefSeq</t> gene models. Numbers below IRGM genotypes indicate the number of independent human specimens sampled. Tables at right depict P values for intergenotype comparisons.
    Hg19 Refseq Gene Models, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/hg19+refseq+gene+models/human+reference+genome+hg19/pmc06383377-122-6-16
    Average 90 stars, based on 1 article reviews
    hg19 refseq gene models - by Bioz Stars, 2026-11
    90/100 stars

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    1) Product Images from "Crohn’s disease IRGM risk alleles are associated with altered gene expression in human tissues"

    Article Title: Crohn’s disease IRGM risk alleles are associated with altered gene expression in human tissues

    Journal: American Journal of Physiology - Gastrointestinal and Liver Physiology

    doi: 10.1152/ajpgi.00196.2018

    Relationship of immunity-related GTPase family M (IRGM) single nucleotide polymorphism to IRGM expression in human terminal ileum and whole blood. RNA-Seq data in the Genotype-Tissue Expression Project portal (https://gtexportal.org/home/) was analyzed to define the relationship of genotypes at rs13361189 (A), rs10065172 (B), and rs9637876 (C) to IRGM mRNA levels in human terminal ileum and whole blood. Box plots depict median and interquartile ranges of transcripts per million (TPM) for mRNA expression of IRGM defined by RefSeq gene models. Numbers below IRGM genotypes indicate the number of independent human specimens sampled. Tables at right depict P values for intergenotype comparisons.
    Figure Legend Snippet: Relationship of immunity-related GTPase family M (IRGM) single nucleotide polymorphism to IRGM expression in human terminal ileum and whole blood. RNA-Seq data in the Genotype-Tissue Expression Project portal (https://gtexportal.org/home/) was analyzed to define the relationship of genotypes at rs13361189 (A), rs10065172 (B), and rs9637876 (C) to IRGM mRNA levels in human terminal ileum and whole blood. Box plots depict median and interquartile ranges of transcripts per million (TPM) for mRNA expression of IRGM defined by RefSeq gene models. Numbers below IRGM genotypes indicate the number of independent human specimens sampled. Tables at right depict P values for intergenotype comparisons.

    Techniques Used: Expressing, RNA Sequencing

    Related Articles

    Expressing:

    Article Title: Crohn’s disease IRGM risk alleles are associated with altered gene expression in human tissues
    Article Snippet: with parameters “-s0 -Sfr -p.” To normalize gene expression quantification, transcripts per million (TPM) values were calculated per gene per sample. .. The annotations for this analysis are hg19 RefSeq gene models downloaded from the University of Californa, Santa Cruz Table Browser ( http://genome.ucsc.edu/ ) on September 22, 2017. .. Gene expression P values between genotypes were calculated in R with the wilcox.test function.

    RNA Sequencing:

    Article Title: Crohn’s disease IRGM risk alleles are associated with altered gene expression in human tissues
    Article Snippet: with parameters “-s0 -Sfr -p.” To normalize gene expression quantification, transcripts per million (TPM) values were calculated per gene per sample. .. The annotations for this analysis are hg19 RefSeq gene models downloaded from the University of Californa, Santa Cruz Table Browser ( http://genome.ucsc.edu/ ) on September 22, 2017. .. Gene expression P values between genotypes were calculated in R with the wilcox.test function.



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    hg19 refseq gene models  (Santa Cruz Biotechnology)
    90
    Santa Cruz Biotechnology hg19 refseq gene models
    Relationship of immunity-related GTPase family M (IRGM) single nucleotide polymorphism to IRGM expression in human terminal ileum and whole blood. RNA-Seq data in the Genotype-Tissue Expression Project portal (https://gtexportal.org/home/) was analyzed to define the relationship of genotypes at rs13361189 (A), rs10065172 (B), and rs9637876 (C) to IRGM mRNA levels in human terminal ileum and whole blood. Box plots depict median and interquartile ranges of transcripts per million (TPM) for mRNA expression of IRGM defined by <t>RefSeq</t> gene models. Numbers below IRGM genotypes indicate the number of independent human specimens sampled. Tables at right depict P values for intergenotype comparisons.
    Hg19 Refseq Gene Models, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/hg19+refseq+gene+models/human+reference+genome+hg19/pmc06383377-122-6-16
    Average 90 stars, based on 1 article reviews
    hg19 refseq gene models - by Bioz Stars, 2026-11
    90/100 stars
    		  Buy from Supplier

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    Relationship of immunity-related GTPase family M (IRGM) single nucleotide polymorphism to IRGM expression in human terminal ileum and whole blood. RNA-Seq data in the Genotype-Tissue Expression Project portal (https://gtexportal.org/home/) was analyzed to define the relationship of genotypes at rs13361189 (A), rs10065172 (B), and rs9637876 (C) to IRGM mRNA levels in human terminal ileum and whole blood. Box plots depict median and interquartile ranges of transcripts per million (TPM) for mRNA expression of IRGM defined by RefSeq gene models. Numbers below IRGM genotypes indicate the number of independent human specimens sampled. Tables at right depict P values for intergenotype comparisons.

    Journal: American Journal of Physiology - Gastrointestinal and Liver Physiology

    Article Title: Crohn’s disease IRGM risk alleles are associated with altered gene expression in human tissues

    doi: 10.1152/ajpgi.00196.2018

    Figure Lengend Snippet: Relationship of immunity-related GTPase family M (IRGM) single nucleotide polymorphism to IRGM expression in human terminal ileum and whole blood. RNA-Seq data in the Genotype-Tissue Expression Project portal (https://gtexportal.org/home/) was analyzed to define the relationship of genotypes at rs13361189 (A), rs10065172 (B), and rs9637876 (C) to IRGM mRNA levels in human terminal ileum and whole blood. Box plots depict median and interquartile ranges of transcripts per million (TPM) for mRNA expression of IRGM defined by RefSeq gene models. Numbers below IRGM genotypes indicate the number of independent human specimens sampled. Tables at right depict P values for intergenotype comparisons.

    Article Snippet: The annotations for this analysis are hg19 RefSeq gene models downloaded from the University of Californa, Santa Cruz Table Browser ( http://genome.ucsc.edu/ ) on September 22, 2017.

    Techniques: Expressing, RNA Sequencing